Mark van Gils
VTT Technical Research Centre of Finland
P.O. Box 1300
tel. +358 20 722 3342
VTT Technical Research Centre of Finland
P.O. Box 106
tel. +358 40 078 4517
Juha Koikkalainen, Harri Pölönen, Jussi Mattila, Mark van Gils, Hilkka Soininen, Jyrki Lötjönen, for the Alzheimer’s Disease Neuroimaging Initiative. Improved Classification of Alzheimer’s Disease Data via Removal of Nuisance Variability. PLoS ONE 7(2): e31112, 2012.
A. Ragauskas, V. Matijosaitis, R. Zakelis, K. Petrikonis, D. Rastenyte, I. Piper, G. Daubaris. Clinical assessment of non-invasive intracranial pressure absolute value measurement method. Neurology, 78:1684-1691, May 22, 2012 .
M. Hartonen, I. Mattila, A.-L. Ruskeepää, M. Orešič, T. Hyötyläinen, Characterization of cerebrospinal fluid by comprehensive two-dimensional gas chromatography coupled to time-of-flight mass spectrometry, J. Chromatogr. A1293, 142-149, 2013
Peer-reviewed Conference Papers
Christian Ledig, Robin Wolz, Paul Aljabar, Jyrki Lötjönen, Rolf A. Heckemann, Alexander Hammers, Daniel Rueckert. Multi-Class Brain Segmentation using Atlas Propagation and EM-Based Refinement. Proceedings of IEEE International Symposium on Biomedical Imaging (ISBI), Barcelona, Spain, 2012.
J Lötjönen, J Mattila, A Simonsen, M van Gils, J Koikkalainen, L Thurfjell, D Menon, O Tenovuo, G Waldemar, H Soininen. Generic evidence-based disease profiling for predicting outcomes: Application to Alzheimer’s disease and Traumatic Brain Injuries. In Proceedings of The Virtual Physiological Human 2012 (VPH2012), London, 2012
M. Jorge Cardoso, Robin Wolz, Marc Modat, Nick C. Fox, Daniel Rueckert, and Sebastien Ourselin. Geodesic Information Flows. In Proceedings of 15th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2012), Nice, France, 2012.
K. K. Bhatia, A. Rao, A. N. Price, R. Wolz, J. Hajnal, D. Rueckert. Hierarchical manifold learning. In Proceedings of15th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2012), Nice, France, 2012.
C. Ledig, R.A. Heckemann, P. Aljabar, R. Wolz, J.V. Hajnal, A. Hammers, D. Rueckert. Segmentation of MRI brain scans using MALP-EM. In MICCAI 2012 Grand Challenge and Workshop on Multi-Atlas Labeling, pp. 79-82, 2012.
C. Ledig, R. Wolz, P. Aljabar, J. Lötjönen, D. Rueckert. PBSI: A symmetric probabilistic extension of the Boundary Shift Integral. In MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders (NIBAD'12), pp. 125-132, 2012.
C. Ledig, R.A. Heckemann, D. Rueckert. Improving whole-brain multilabel segmentations through learned intensity-based statistical corrections. SPIE Medical Imaging, 2013, Image Processing, 86691M, 2013.
Olli Tenovuo, David Menon, Ari Katila, Jonathan Coles, Janek Frantzén and Joanna Outtrim - on behalf of the TBIcare collaborators. TBIcare – a new way to use traumatic brain injury biomarkers. In proceedings of National Neurotrauma Symposium 2011, Ft. Lauderdale, 2011.
Olli Tenovuo, David K. Menon, Ari Katila, Jonathan P. Coles, Janek Frantzén and Joanna Outtrim, on behalf of the TBIcare collaborators. TBIcare – a new way to use traumatic brain injury biomarkers. In proceedings of 2011 International scientific conference for Biochemical Markers of Brain Damage, Lund, Sweden, 2011.
Antti Tanner, Mika Sarkela, Antti Tolonen, Loretta Norton, Corrine Davies-Schninkel, Michael Sharpe, G. Bryan Young. A Novel Method for Automatic Detection and Visualization of Non-Convulsive Seizures in ICU. In proceedings of The 64th AAN Annual Meeting, 2012; 78 (Meeting Abstracts 1). P04.016, New Orleans, Louisiana, 2012.
Olli Tenovuo, David Menon, Ari Katila, Jonathan Coles, Janek Frantzén, Joanna Outtrim. TBIcare – a new way to use traumatic brain injury biomarkers. Proceedings of Ninth World Congress on Brain Injury, Edinburgh, 2012.
Olli Tenovuo, David Menon, Ari Katila, Jonathan Coles, Janek Frantzén, Joanna Outtrim. The International TBIcare Study – Preliminary Results. Proceedings of National Neurotrauma Symposium 2012, Phoenix, Arizona, 2012.
Ragauskas A, Zakelis R, Petkus V, Daubaris G, Bartusis L. Human brain in microgravity: how to measure intracranial pressure non-invasively? In Proceedings of 28th Annual Meeting of the American Society for Gravitational and Space Research, 2012.
Ragauskas A. How to measure intracranial pressure non-invasively. Proceedings of Asian Clinical Congress, Bangkok, Thailand, January 2013.
A.Ragauskas, L.Bartusis, R.Zakelis, G.Daubaris, V.Matijosaitis, K.Petrikonis, D.Rastenyte. Receiver operating characteristic analysis of noninvasive intracranial pressure measurement methods. Cerebrovasc Dis (Abstracts of 18th Meeting of the European Society of Neurosonology and Cerebral Hemodynamics), 35(suppl 1), p.72, 2013.
Olli Tenovuo, David Menon, Ari Katila, Jonathan Coles, Janek Frantzen, Jo Outtrim – on behalf of the TBIcare comsortium. TBIcare software as a clinical aid in brain injury medicine. Proceedings of National Neurotrauma Symposium 2013, Nashville TN, August 2013.
Harri Siitari and Olli Tenovuo – on behalf of the TBIcare consortium. TBIcare: Developing personalised solutions for the treatment of traumatic brain injury. Press release VTT and TUCH, 24 February 2011.
Mark van Gils and Olli Tenovuo. Developing personalised solutions for the treatment of traumatic brain injury: The TBIcare project. Cybertherapy & Rehabilitation, 2011(1):34-35, 2011.
Mark van Gils. TBIcare: Evidence based Diagnostic and Treatment Planning Solution for Traumatic Brain Injuries. FP7 Resource book of eHealth projects, 2011.
Mark van Gils and Olli Tenovuo. The TBIcare project: Evidence-based Diagnostic and Treatment Planning Solution for Traumatic Brain Injuries. VPH Newsletter, 2011.
Olli Tenovuo and David Menon. The TBIcare project: Evidence based Diagnostic and Treatment Planning Solution for Traumatic Brain Injuries. IBIA International Neurotrauma Letter, February 2012.
D. Rueckert. Learning and Discovery of Clinically Useful Information from Medical Images. IEEE EMBS Grand Challenge Meeting, Washington, DC, February 2012.
Jyrki Lötjönen. Evidence-based data mining. Orion Pharma, Espoo, Finland, March 27, 2012.
Harri Siitari. VTT Technologies for health – tools for future personalized, pre-emptive and predictive health care. India – European Union / Member States Conference, The Indo-European Research and Innovation Partnership. Brussels, May 31 - June 1, 2012.
Harri Siitari. Integrated technology solutions for adding value in diagnostics. Biotechnology in Health and Disease. Turku, March 26-28, 2012.
Harri Siitari. Personalized solutions for the diagnosis of brain diseases. TuBS Summer School 2012. Turku, August 15, 2012.
C. Ledig. Multi-class brain segmentation and atrophy measurement using Expectation-Maximization. The Neurodis Foundation, Lyon, France, May 2012.
D. Rueckert, Learning and Discovery of Clinically Useful Information from Medical Images. Microsoft Research Cambridge, UK, May 2012.
D. Rueckert. Machine learning meets medical imaging: From signals to clinically useful information. Scientific Computing and Imaging Institute, University of Utah, September 2012.
C. Ledig. Structural atrophy measurement and multi-class segmentation on MR brain scans. VTT Technical Research Centre of Finland, Tampere, Finland, September 2012.
J Lötjönen, J Mattila, A Simonsen, M van Gils, J Koikkalainen, L Thurfjell, D Menon, O Tenovuo, G Waldemar, H Soininen. Visualizing the disease state fingerprint for predicting clinical outcomes: Application to Alzheimer’s disease and Traumatic Brain Injuries. BioIT World Conference and Expo, Boston 8-9 April 2013.
M. van Gils. Decision support systems for neurosciences, Crosslinks Turku 2013 - Neuroscience, April 16, 2013.